SubtiBank SubtiBank
adhB [2018-02-13T00:57:07.000Z]
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adhB [2018-02-13T00:57:07.000Z]

forespore-specific protein, similar to alcohol dehydrogenase
locus
BSU26970
pI
5.66
mw
41.04 kDa
protein length
378 aa Sequence Blast
gene length
1134 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.4|Sporulation proteins/ other]
  • [category|SW 6|Groups of genes] → [category|SW 6.6|Poorly characterized/ putative enzymes]

    • Gene

    Coordinates
    2,753,452 → 2,754,588

    The protein

    Protein family

  • Class-III subfamily (according to Swiss-Prot)

    • Paralogous protein(s)

  • [protein|7F4C5AD47D167683F96CC2841039512E70CC4F1C|YycR] (33%)

    • Structure

  • [PDB|4CPD] (from Thermus Sp., 34% identity)

    • [SW|Localization]

  • spore wall (according to Swiss-Prot)

    • Expression and Regulation

    Operons

    genes
    [gene|7D61DB3A298C253BBC1C7B3AE169F8AAAE4610BB|yraG]-[gene|30A4306899B586898BC5B3666AD43D9DEE0579E1|yraF]-[gene|EA4CC0D36C39957DBBF9B1B11F65F33E8CD81FFE|adhB]-[gene|1D9D20DA24C13EF450710E8EDC5A36311DAF1BF0|yraE]-[gene|0D99D9ECB3BCD6E3F58F8CE8E8CC5AF718C1ECD8|yraD]
    description
    [Pubmed|16497325]

    sigma factors

  • [protein|5F24258282F3166B7696B9E9ABC1706E4D06C944|SigG]: sigma factor, [Pubmed|16497325], in [regulon|5F24258282F3166B7696B9E9ABC1706E4D06C944|SigG regulon]

    • regulation

  • expressed during sporulation in the forespore ([protein|search|SigG]) [Pubmed|16497325]
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    Biological materials

    Mutant

  • MGNA-A261 (adhB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/261 NBRP B. subtilis, Japan]
  • BKE26970 (Δ[gene|EA4CC0D36C39957DBBF9B1B11F65F33E8CD81FFE|adhB]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE26970 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGCTGTAAAACCTCCAGT, downstream forward: _UP4_CCTTAAAAAACGGAGGTTAC
  • BKK26970 (Δ[gene|EA4CC0D36C39957DBBF9B1B11F65F33E8CD81FFE|adhB]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK26970 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGCTGTAAAACCTCCAGT, downstream forward: _UP4_CCTTAAAAAACGGAGGTTAC

    • References

  • 16497325